STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQR32226.123S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)    
Predicted Functional Partners:
KQR33420.1
50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.997
KQR33436.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.994
KQR33449.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.994
KQR30699.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
KQR33433.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.991
KQR36772.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.990
KQR33430.1
50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.985
KQR33427.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.972
KQR33437.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.969
KQR33438.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.968
Your Current Organism:
Rhizobium sp. Leaf155
NCBI taxonomy Id: 1736278
Other names: R. sp. Leaf155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.