STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQR46301.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)    
Predicted Functional Partners:
KQR44652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
KQR46300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
ribA
GTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
    
   0.431
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
   0.431
KQR46971.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.416
KQR47378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.416
KQR46236.1
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.414
pheT
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.403
ASF82_11945
Inosine-5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.403
Your Current Organism:
Frigoribacterium sp. Leaf164
NCBI taxonomy Id: 1736282
Other names: F. sp. Leaf164
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.