STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQR66348.1Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)    
Predicted Functional Partners:
KQR66347.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
ASF89_04370
Rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.989
KQR66349.1
Alpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.761
KQR65953.1
L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.725
KQR66345.1
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.649
KQR66779.1
alpha-L-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.619
araB
Ribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.548
KQR65656.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RbsD / FucU family.
 
 
  0.546
KQR66770.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.545
KQR65977.1
Fucose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RbsD / FucU family.
 
 
  0.542
Your Current Organism:
Frigoribacterium sp. Leaf172
NCBI taxonomy Id: 1736285
Other names: F. sp. Leaf172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.