STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQR62958.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)    
Predicted Functional Partners:
KQR62959.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
KQR62960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.877
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
     
 0.642
KQR64528.1
Chromosome replication initiation inhibitor protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
   
    0.548
KQR65838.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.507
KQR63993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.491
deoC
2-deoxyribose-5-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
  0.489
KQR62405.1
Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.480
KQR66326.1
Cysteine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.467
KQR63863.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.467
Your Current Organism:
Frigoribacterium sp. Leaf172
NCBI taxonomy Id: 1736285
Other names: F. sp. Leaf172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.