STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQR71409.1Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)    
Predicted Functional Partners:
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 
 0.914
KQR72463.1
Maltose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.893
KQR72739.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
     
 0.893
KQR70167.1
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.789
KQR70367.1
Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.773
KQR72308.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.725
KQR68100.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.725
KQR68102.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.725
KQR68130.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.725
KQR68195.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.725
Your Current Organism:
Pedobacter sp. Leaf176
NCBI taxonomy Id: 1736286
Other names: P. sp. Leaf176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.