STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQS41963.1alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)    
Predicted Functional Partners:
KQS41275.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.898
KQS41959.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.743
KQS41208.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.717
KQS32429.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.640
KQS36773.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.636
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BshC family.
       0.622
KQS35733.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
  
 
  0.549
KQS36772.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
KQS36441.1
Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.468
KQS41964.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.
       0.425
Your Current Organism:
Pedobacter sp. Leaf194
NCBI taxonomy Id: 1736297
Other names: P. sp. Leaf194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.