STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQU28380.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
KQU29383.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.974
KQU27956.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
KQU39551.1
DNA exonuclease SbcCD subunit SbcD; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.797
KQU39664.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.775
KQU39144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.740
KQU36431.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.733
KQU28480.1
3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
KQU34510.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.718
KQU31144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.718
KQU30539.1
Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.718
Your Current Organism:
Rhodococcus sp. Leaf225
NCBI taxonomy Id: 1736300
Other names: R. sp. Leaf225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.