STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQN92961.1General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (60 aa)    
Predicted Functional Partners:
KQN92599.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.894
KQN94385.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.831
KQN92764.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.797
KQN92601.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.693
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
       0.622
KQN91105.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
KQN94434.1
Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.499
KQN93932.1
Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.480
KQN92598.1
DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
 
  
 0.475
KQN90270.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.459
Your Current Organism:
Sphingomonas sp. Leaf231
NCBI taxonomy Id: 1736301
Other names: S. sp. Leaf231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.