STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP14954.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
KQP14955.1
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.
 
  0.964
KQP14953.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.923
ASF43_29575
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.884
ASF43_12930
Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.836
KQP22160.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.828
KQP22871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.824
KQP22478.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.822
KQP17606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.822
KQP18052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.822
KQP18316.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.822
Your Current Organism:
Pseudorhodoferax sp. Leaf267
NCBI taxonomy Id: 1736316
Other names: P. sp. Leaf267
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