KQP83473.1 protein (Aeromicrobium sp. Leaf291)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KQP83473.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)

Predicted Functional Partners:

KQP83879.1

0.901

KQP84463.1

0.901

KQP84475.1

0.901

KQP84483.1

0.901

KQP84508.1

0.901

KQP82043.1

0.901

KQP82055.1

0.901

KQP82089.1

0.901

KQP82412.1

0.901

KQP84462.1

0.900

Your Current Organism:

Aeromicrobium sp. Leaf291

NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQP82043.1	KQP82055.1	ASF35_11335	ASF35_11405	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82043.1	KQP82089.1	ASF35_11335	ASF35_11610	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82043.1	KQP82412.1	ASF35_11335	ASF35_13450	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
KQP82043.1	KQP83473.1	ASF35_11335	ASF35_00245	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
KQP82043.1	KQP83879.1	ASF35_11335	ASF35_02600	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82043.1	KQP84462.1	ASF35_11335	ASF35_06070	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82043.1	KQP84463.1	ASF35_11335	ASF35_06075	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82043.1	KQP84475.1	ASF35_11335	ASF35_06140	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82043.1	KQP84483.1	ASF35_11335	ASF35_06180	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82043.1	KQP84508.1	ASF35_11335	ASF35_06340	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82055.1	KQP82043.1	ASF35_11405	ASF35_11335	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82055.1	KQP82089.1	ASF35_11405	ASF35_11610	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82055.1	KQP82412.1	ASF35_11405	ASF35_13450	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
KQP82055.1	KQP83473.1	ASF35_11405	ASF35_00245	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
KQP82055.1	KQP83879.1	ASF35_11405	ASF35_02600	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82055.1	KQP84462.1	ASF35_11405	ASF35_06070	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82055.1	KQP84463.1	ASF35_11405	ASF35_06075	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82055.1	KQP84475.1	ASF35_11405	ASF35_06140	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82055.1	KQP84483.1	ASF35_11405	ASF35_06180	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82055.1	KQP84508.1	ASF35_11405	ASF35_06340	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999