Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KQP83831.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)    
Predicted Functional Partners:
KQP85143.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
KQP85144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
KQP83832.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
KQP84611.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
ASF35_07745
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
KQP84610.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.959
KQP84747.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.947
KQP85254.1
Molybdenum ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.938
KQP84608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.935
KQP81701.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.852
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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