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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP83848.1D-3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)    
Predicted Functional Partners:
KQP84547.1
Phosphoserine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
KQP84138.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.877
KQP84473.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.799
KQP85233.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.797
KQP83447.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.786
KQP85234.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.786
KQP84507.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.783
KQP84756.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.783
KQP84757.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.783
KQP84481.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.782
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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