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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP83878.1Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)    
Predicted Functional Partners:
KQP83879.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.913
KQP80856.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.865
KQP83876.1
50S ribosomal protein L9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.837
KQP84108.1
DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.825
KQP81502.1
DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.824
KQP85012.1
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.821
KQP81972.1
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.821
KQP84891.1
Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.818
KQP83877.1
30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.789
KQP84639.1
Ribonuclease H; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.769
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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