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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP83896.1Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)    
Predicted Functional Partners:
KQP82044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.991
KQP83897.1
Preprotein translocase YidC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
KQP83895.1
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.958
KQP85156.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.878
KQP84755.1
Ribonuclease G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.835
KQP83521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.819
KQP81911.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.723
KQP85234.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.722
KQP84473.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.722
KQP85038.1
Tryptophan synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.722
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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