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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP85156.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)    
Predicted Functional Partners:
KQP83898.1
50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.988
KQP83897.1
Preprotein translocase YidC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.921
KQP83896.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.878
KQP83895.1
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.875
KQP83899.1
Chromosomal replication initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.851
KQP83521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.828
KQP83900.1
DNA polymerase III subunit beta; Binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.793
KQP84755.1
Ribonuclease G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.791
KQP84466.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.779
KQP84462.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.776
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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