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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP83983.1Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)    
Predicted Functional Partners:
KQP85175.1
Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.786
KQP81932.1
ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.771
KQP85176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.721
KQP81933.1
ATP synthase F0F1 subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.603
KQP84499.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.565
KQP81934.1
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.504
KQP84501.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.500
KQP82307.1
PEBP family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.499
KQP83879.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.497
KQP84434.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.497
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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