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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP84075.1Ribonuclease activity regulator protein RraA; Regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
KQP82461.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.784
KQP81749.1
Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.784
KQP82533.1
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.634
KQP84076.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
KQP80768.1
Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.474
KQP84169.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.456
KQP84834.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.419
KQP84614.1
Fumarate hydratase; Catalyzes the formation of malate from fumerate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.418
KQP85221.1
O-succinylbenzoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.415
KQP83941.1
Diphosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.403
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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