KQP84154.1 protein (Aeromicrobium sp. Leaf291)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KQP84154.1

Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)

Predicted Functional Partners:

KQP84155.1

0.887

KQP83818.1

0.847

KQP81966.1

0.839

KQP81965.1

0.832

KQP84151.1

0.826

KQP81938.1

0.709

KQP84945.1

0.677

KQP84398.1

0.615

KQP84152.1

0.575

KQP84875.1

0.567

Your Current Organism:

Aeromicrobium sp. Leaf291

NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQP81938.1	KQP83818.1	ASF35_10755	ASF35_02240	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
KQP81938.1	KQP84152.1	ASF35_10755	ASF35_04240	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KQP81938.1	KQP84154.1	ASF35_10755	ASF35_04250	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KQP81965.1	KQP81966.1	ASF35_10900	ASF35_10905	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP81965.1	KQP83818.1	ASF35_10900	ASF35_02240	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
KQP81965.1	KQP84152.1	ASF35_10900	ASF35_04240	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
KQP81965.1	KQP84154.1	ASF35_10900	ASF35_04250	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
KQP81965.1	KQP84398.1	ASF35_10900	ASF35_05690	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH-quinone oxidoreductase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
KQP81966.1	KQP81965.1	ASF35_10905	ASF35_10900	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP81966.1	KQP83818.1	ASF35_10905	ASF35_02240	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
KQP81966.1	KQP84152.1	ASF35_10905	ASF35_04240	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
KQP81966.1	KQP84154.1	ASF35_10905	ASF35_04250	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
KQP83818.1	KQP81938.1	ASF35_02240	ASF35_10755	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
KQP83818.1	KQP81965.1	ASF35_02240	ASF35_10900	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
KQP83818.1	KQP81966.1	ASF35_02240	ASF35_10905	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
KQP83818.1	KQP84152.1	ASF35_02240	ASF35_04240	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
KQP83818.1	KQP84154.1	ASF35_02240	ASF35_04250	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
KQP84151.1	KQP84152.1	ASF35_04235	ASF35_04240	Catalyzes the release of sulfite from alkanesulfonates; Derived by automated computational analysis using gene prediction method: Protein Homology.	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
KQP84151.1	KQP84154.1	ASF35_04235	ASF35_04250	Catalyzes the release of sulfite from alkanesulfonates; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
KQP84151.1	KQP84155.1	ASF35_04235	ASF35_04255	Catalyzes the release of sulfite from alkanesulfonates; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dimethyl sulfone monooxygenase SfnG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822