Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KQP84219.150S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology. (40 aa)    
Predicted Functional Partners:
KQP84225.1
30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.969
KQP84220.1
50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
KQP84462.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
KQP84463.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
fusA
Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
KQP84466.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
KQP84471.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
KQP84472.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
KQP84474.1
50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
KQP84475.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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