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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP84253.1Tryptophan 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)    
Predicted Functional Partners:
KQP82091.1
Kynureninase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
KQP85038.1
Tryptophan synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.869
KQP81827.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.860
KQP83497.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.782
KQP81287.1
Septum formation protein Maf; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.778
KQP82293.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.706
KQP84254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
KQP84255.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
KQP84256.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
KQP84203.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.583
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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