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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP84288.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)    
Predicted Functional Partners:
KQP85318.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.867
KQP81965.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.778
KQP84289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.684
KQP81674.1
acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.673
KQP84714.1
1,2-oxophytodienoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.658
KQP81966.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.635
KQP84290.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.600
KQP84144.1
CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.586
KQP84287.1
alpha-L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
KQP84291.1
Phosphoribosylglycinamide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.471
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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