Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KQP84639.1Ribonuclease H; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)    
Predicted Functional Partners:
KQP85052.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.888
ASF35_11370
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.830
KQP84891.1
Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.821
KQP83447.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.637
KQP83764.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.608
KQP83878.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.608
KQP82454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.608
KQP81633.1
Single-stranded DNA-binding protein; Binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.608
KQP81678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.592
KQP84637.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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