Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KQP84694.1ATP-dependent carboxylate-amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)    
Predicted Functional Partners:
KQP85154.1
UDP-N-acetylmuramate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.900
KQP85267.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.894
KQP81331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.858
KQP85318.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.846
KQP84627.1
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.829
KQP84256.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.821
KQP85307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.821
KQP84281.1
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.809
KQP84899.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.804
KQP84933.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.804
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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