KQP84722.1 protein (Aeromicrobium sp. Leaf291)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KQP84722.1

Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)

Predicted Functional Partners:

KQP84418.1

0.927

KQP81746.1

0.900

KQP83818.1

0.885

KQP84073.1

0.879

KQP83819.1

0.873

KQP82523.1

0.873

KQP83968.1

0.871

KQP85286.1

0.870

KQP82497.1

0.839

KQP85318.1

0.822

Your Current Organism:

Aeromicrobium sp. Leaf291

NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQP81746.1	KQP82497.1	ASF35_16085	ASF35_11140	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
KQP81746.1	KQP82523.1	ASF35_16085	ASF35_12535	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
KQP81746.1	KQP83818.1	ASF35_16085	ASF35_02240	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
KQP81746.1	KQP83819.1	ASF35_16085	ASF35_02245	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
KQP81746.1	KQP83968.1	ASF35_16085	ASF35_03170	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.871
KQP81746.1	KQP84073.1	ASF35_16085	ASF35_03795	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.886
KQP81746.1	KQP84418.1	ASF35_16085	ASF35_05810	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.810
KQP81746.1	KQP84722.1	ASF35_16085	ASF35_07600	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
KQP81746.1	KQP85286.1	ASF35_16085	ASF35_08205	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
KQP81746.1	KQP85318.1	ASF35_16085	ASF35_09485	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
KQP82497.1	KQP81746.1	ASF35_11140	ASF35_16085	Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
KQP82497.1	KQP82523.1	ASF35_11140	ASF35_12535	Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.884
KQP82497.1	KQP83818.1	ASF35_11140	ASF35_02240	Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
KQP82497.1	KQP83819.1	ASF35_11140	ASF35_02245	Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
KQP82497.1	KQP84722.1	ASF35_11140	ASF35_07600	Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
KQP82497.1	KQP85286.1	ASF35_11140	ASF35_08205	Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.871
KQP82523.1	KQP81746.1	ASF35_12535	ASF35_16085	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
KQP82523.1	KQP82497.1	ASF35_12535	ASF35_11140	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.884
KQP82523.1	KQP83818.1	ASF35_12535	ASF35_02240	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP82523.1	KQP83819.1	ASF35_12535	ASF35_02245	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.825