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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP84894.1Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)    
Predicted Functional Partners:
KQP84484.1
50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
KQP84443.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.983
KQP84474.1
50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.983
KQP84469.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.982
KQP85234.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.980
KQP84467.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.967
KQP84470.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.964
KQP84476.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.964
KQP84473.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.962
KQP84482.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.962
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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