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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP85300.1Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)    
Predicted Functional Partners:
KQP84916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.735
KQP83896.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.519
KQP84917.1
Peptide chain release factor 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.511
KQP84809.1
rRNA maturation RNase YbeY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.489
KQP85137.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.462
KQP82090.1
Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.460
KQP84403.1
Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.439
KQP84981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.439
KQP81262.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.416
KQP84669.1
Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.400
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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