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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP84917.1Peptide chain release factor 3; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)    
Predicted Functional Partners:
KQP84444.1
50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.969
KQP84467.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.968
KQP84757.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.965
KQP84434.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.964
rplS
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.962
KQP80756.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.961
KQP83876.1
50S ribosomal protein L9; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.957
KQP84501.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.954
KQP84756.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.954
KQP84507.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.939
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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