KQP85018.1 protein (Aeromicrobium sp. Leaf291)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KQP85018.1

Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)

Predicted Functional Partners:

KQP85017.1

0.999

KQP85019.1

0.999

KQP85024.1

0.999

KQP83965.1

0.998

KQP85016.1

0.998

KQP85021.1

0.995

KQP84174.1

0.993

KQP85027.1

0.991

KQP80762.1

0.988

hisE

0.977

Your Current Organism:

Aeromicrobium sp. Leaf291

NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQP80762.1	KQP83965.1	ASF35_17005	ASF35_03150	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
KQP80762.1	KQP84174.1	ASF35_17005	ASF35_04360	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
KQP80762.1	KQP85016.1	ASF35_17005	ASF35_09360	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
KQP80762.1	KQP85017.1	ASF35_17005	ASF35_09365	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
KQP80762.1	KQP85018.1	ASF35_17005	ASF35_09370	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
KQP80762.1	KQP85019.1	ASF35_17005	ASF35_09375	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Imidazole glycerol phosphate synthase subunit HisH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
KQP80762.1	KQP85021.1	ASF35_17005	ASF35_09385	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KQP80762.1	KQP85024.1	ASF35_17005	ASF35_09400	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Imidazole glycerol phosphate synthase subunit HisH; Catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KQP80762.1	KQP85027.1	ASF35_17005	ASF35_09415	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phosphoribosyl-AMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
KQP80762.1	hisE	ASF35_17005	ASF35_17010	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phosphoribosyl-ATP pyrophosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83965.1	KQP80762.1	ASF35_03150	ASF35_17005	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
KQP83965.1	KQP84174.1	ASF35_03150	ASF35_04360	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.886
KQP83965.1	KQP85016.1	ASF35_03150	ASF35_09360	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.891
KQP83965.1	KQP85017.1	ASF35_03150	ASF35_09365	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.891
KQP83965.1	KQP85018.1	ASF35_03150	ASF35_09370	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KQP83965.1	KQP85019.1	ASF35_03150	ASF35_09375	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Imidazole glycerol phosphate synthase subunit HisH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
KQP83965.1	KQP85021.1	ASF35_03150	ASF35_09385	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQP83965.1	KQP85024.1	ASF35_03150	ASF35_09400	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Imidazole glycerol phosphate synthase subunit HisH; Catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.879
KQP83965.1	KQP85027.1	ASF35_03150	ASF35_09415	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phosphoribosyl-AMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
KQP83965.1	hisE	ASF35_03150	ASF35_17010	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phosphoribosyl-ATP pyrophosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.728