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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP85052.1DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (887 aa)    
Predicted Functional Partners:
KQP83900.1
DNA polymerase III subunit beta; Binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KQP81817.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KQP82112.1
DNA recombination/repair protein RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
KQP82135.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.984
KQP83597.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.980
KQP82014.1
glycine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.975
KQP84889.1
Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.954
KQP83601.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
KQP82516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
KQP82285.1
ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.942
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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