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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP85323.1Queuine tRNA-ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)    
Predicted Functional Partners:
KQP84316.1
glutamyl-Q tRNA(Asp) ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
KQP85072.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.754
KQP85324.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.621
guaA
GMP synthetase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.583
KQP82313.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.538
KQP82352.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.538
KQP80803.1
histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.512
KQP85077.1
Preprotein translocase subunit SecD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.439
KQP80802.1
aspartate--tRNA(Asp/Asn) ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.434
KQP82090.1
Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.419
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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