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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP82033.1Signal recognition particle-docking protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)    
Predicted Functional Partners:
KQP82036.1
Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
KQP84486.1
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.994
KQP84432.1
Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.991
KQP82271.1
Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.991
KQP84482.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.979
KQP84467.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.976
KQP84469.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.975
KQP84470.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.974
KQP84474.1
50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.973
KQP84476.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.971
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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