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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP82501.1tRNA (guanine-N1)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
KQP82043.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
rplS
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.976
KQP82045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.970
KQP84500.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.895
KQP84499.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.883
KQP82055.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
KQP82056.1
Elongation factor Ts; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.874
KQP84467.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.861
KQP84470.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.860
KQP82081.1
Translation initiation factor IF-2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.855
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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