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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP82197.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
KQP83892.1
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.957
KQP83966.1
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
KQP83702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.827
KQP85318.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.799
KQP82268.1
Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.797
fusA
Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.787
KQP83962.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.771
KQP85176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.771
KQP81658.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.771
KQP84465.1
Elongation factor Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.744
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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