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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP82309.1Peptide deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)    
Predicted Functional Partners:
KQP85234.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.998
KQP84501.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.993
KQP83879.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.983
KQP84477.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.979
KQP84756.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.978
KQP84795.1
30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.978
KQP80756.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.978
KQP84482.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.977
KQP84434.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.975
KQP84508.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.973
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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