KQP82310.1 protein (Aeromicrobium sp. Leaf291)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KQP82310.1

butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)

Predicted Functional Partners:

KQP81966.1

0.895

KQP81965.1

0.885

KQP83818.1

0.875

KQP82311.1

0.833

KQP81938.1

0.709

KQP84945.1

0.677

KQP81691.1

0.627

KQP84398.1

0.615

KQP84875.1

0.567

KQP81714.1

0.567

Your Current Organism:

Aeromicrobium sp. Leaf291

NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQP81691.1	KQP82310.1	ASF35_13730	ASF35_12860	Diacylglycerol O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.627
KQP81691.1	KQP82311.1	ASF35_13730	ASF35_12865	Diacylglycerol O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
KQP81691.1	KQP83818.1	ASF35_13730	ASF35_02240	Diacylglycerol O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.585
KQP81714.1	KQP82310.1	ASF35_14530	ASF35_12860	Malate:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
KQP81714.1	KQP82311.1	ASF35_14530	ASF35_12865	Malate:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
KQP81714.1	KQP84945.1	ASF35_14530	ASF35_08955	Malate:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
KQP81938.1	KQP82310.1	ASF35_10755	ASF35_12860	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KQP81938.1	KQP82311.1	ASF35_10755	ASF35_12865	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KQP81938.1	KQP83818.1	ASF35_10755	ASF35_02240	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
KQP81965.1	KQP81966.1	ASF35_10900	ASF35_10905	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP81965.1	KQP82310.1	ASF35_10900	ASF35_12860	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
KQP81965.1	KQP82311.1	ASF35_10900	ASF35_12865	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
KQP81965.1	KQP83818.1	ASF35_10900	ASF35_02240	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
KQP81965.1	KQP84398.1	ASF35_10900	ASF35_05690	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH-quinone oxidoreductase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
KQP81966.1	KQP81965.1	ASF35_10905	ASF35_10900	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP81966.1	KQP82310.1	ASF35_10905	ASF35_12860	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.895
KQP81966.1	KQP82311.1	ASF35_10905	ASF35_12865	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.890
KQP81966.1	KQP83818.1	ASF35_10905	ASF35_02240	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
KQP82310.1	KQP81691.1	ASF35_12860	ASF35_13730	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diacylglycerol O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.627
KQP82310.1	KQP81714.1	ASF35_12860	ASF35_14530	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Malate:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567