Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
KQP81206.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)    
Predicted Functional Partners:
KQP82141.1
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides; the rate-limiting step in dNTP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.980
KQP80794.1
Holliday junction resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.767
KQP82306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.672
KQP84138.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.654
KQP83900.1
DNA polymerase III subunit beta; Binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.652
KQP84074.1
DtxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.652
KQP81205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.630
KQP81735.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.628
KQP81204.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.623
KQP82461.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.597
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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