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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASF35_14110Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
KQP85269.1
DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.906
KQP85052.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.839
KQP81447.1
DNA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.834
KQP85312.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.786
KQP85292.1
Ribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.767
KQP82112.1
DNA recombination/repair protein RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.683
KQP81643.1
Endonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.608
KQP84351.1
Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.460
KQP82537.1
5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.458
KQP85069.1
dephospho-CoA kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.445
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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