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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP81236.1HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)    
Predicted Functional Partners:
KQP80829.1
HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.888
KQP81707.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
KQP81235.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
KQP84456.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.554
KQP80773.1
DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.531
prfB
Peptide chain release factor 2; Recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
KQP81798.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.424
KQP82150.1
NgoFVII family restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.424
KQP81204.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.424
KQP82516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.418
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.