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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP81710.1Transcription factor WhiB; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)    
Predicted Functional Partners:
KQP82403.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.836
KQP82267.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.801
KQP82049.1
Protein often found in actinomycetes clustered with signal peptidase and/or RNaseHII; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
KQP81205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.731
KQP84373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
KQP80773.1
DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.707
KQP81272.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.706
KQP82271.1
Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.691
KQP81271.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.684
KQP81942.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.