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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP81365.1Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)    
Predicted Functional Partners:
KQP82412.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.786
KQP84881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.776
KQP84809.1
rRNA maturation RNase YbeY; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.773
KQP82081.1
Translation initiation factor IF-2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.773
KQP84475.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.689
KQP83962.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.633
KQP83646.1
Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.606
KQP81364.1
Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.587
KQP83693.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.576
KQP85176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.576
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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