KQP81378.1 protein (Aeromicrobium sp. Leaf291)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KQP81378.1

Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)

Predicted Functional Partners:

KQP80807.1

0.944

KQP81383.1

0.929

KQP85214.1

0.927

KQP85230.1

0.919

KQP84957.1

0.874

KQP81379.1

0.833

KQP84997.1

0.822

KQP84863.1

0.821

KQP81197.1

0.819

KQP83674.1

0.818

Your Current Organism:

Aeromicrobium sp. Leaf291

NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQP80807.1	KQP81378.1	ASF35_17270	ASF35_15105	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
KQP80807.1	KQP81383.1	ASF35_17270	ASF35_15130	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
KQP80807.1	KQP83674.1	ASF35_17270	ASF35_01430	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
KQP80807.1	KQP84957.1	ASF35_17270	ASF35_09020	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.879
KQP80807.1	KQP84997.1	ASF35_17270	ASF35_09255	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
KQP80807.1	KQP85214.1	ASF35_17270	ASF35_05280	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
KQP80807.1	KQP85230.1	ASF35_17270	ASF35_05885	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
KQP81197.1	KQP81378.1	ASF35_14035	ASF35_15105	Nicotinate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819
KQP81378.1	KQP80807.1	ASF35_15105	ASF35_17270	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
KQP81378.1	KQP81197.1	ASF35_15105	ASF35_14035	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nicotinate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819
KQP81378.1	KQP81379.1	ASF35_15105	ASF35_15110	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
KQP81378.1	KQP81383.1	ASF35_15105	ASF35_15130	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
KQP81378.1	KQP83674.1	ASF35_15105	ASF35_01430	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
KQP81378.1	KQP84863.1	ASF35_15105	ASF35_08450	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
KQP81378.1	KQP84957.1	ASF35_15105	ASF35_09020	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
KQP81378.1	KQP84997.1	ASF35_15105	ASF35_09255	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
KQP81378.1	KQP85214.1	ASF35_15105	ASF35_05280	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
KQP81378.1	KQP85230.1	ASF35_15105	ASF35_05885	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
KQP81379.1	KQP81378.1	ASF35_15110	ASF35_15105	Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
KQP81383.1	KQP80807.1	ASF35_15130	ASF35_17270	Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765