Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KQP81532.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
KQP81533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.805
KQP81534.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
KQP81535.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
KQP82402.1
Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.670
KQP81536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.596
KQP84693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.580
KQP81529.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.555
KQP81528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.553
KQP81530.1
AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
KQP81531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.553
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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