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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP80752.1phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)    
Predicted Functional Partners:
KQP80751.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KQP82090.1
Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.828
KQP84500.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.807
fusA
Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.788
KQP80756.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.788
KQP84473.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.749
KQP84455.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.721
KQP83652.1
serine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.716
KQP80753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.711
KQP84463.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.708
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.