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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP80754.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
KQP80755.1
RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
KQP80756.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
KQP80753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.707
KQP80757.1
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
KQP80758.1
Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
KQP80751.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.564
KQP80752.1
phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.514
KQP84203.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.451
KQP84873.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.451
KQP81827.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.451
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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