ASF35_17075 protein (Aeromicrobium sp. Leaf291)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ASF35_17075

Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)

Predicted Functional Partners:

KQP83879.1

0.996

KQP84462.1

0.996

KQP84463.1

0.996

KQP84466.1

0.996

KQP84471.1

0.996

KQP84472.1

0.996

KQP84475.1

0.996

KQP84480.1

0.996

KQP84483.1

0.996

KQP84498.1

0.996

Your Current Organism:

Aeromicrobium sp. Leaf291

NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASF35_17075	KQP83879.1	ASF35_17075	ASF35_02600	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84462.1	ASF35_17075	ASF35_06070	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84463.1	ASF35_17075	ASF35_06075	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84466.1	ASF35_17075	ASF35_06090	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84471.1	ASF35_17075	ASF35_06115	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84472.1	ASF35_17075	ASF35_06125	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84475.1	ASF35_17075	ASF35_06140	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84480.1	ASF35_17075	ASF35_06165	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84483.1	ASF35_17075	ASF35_06180	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ASF35_17075	KQP84498.1	ASF35_17075	ASF35_06280	Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KQP83879.1	ASF35_17075	ASF35_02600	ASF35_17075	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KQP83879.1	KQP84462.1	ASF35_02600	ASF35_06070	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83879.1	KQP84463.1	ASF35_02600	ASF35_06075	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83879.1	KQP84466.1	ASF35_02600	ASF35_06090	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83879.1	KQP84471.1	ASF35_02600	ASF35_06115	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83879.1	KQP84472.1	ASF35_02600	ASF35_06125	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83879.1	KQP84475.1	ASF35_02600	ASF35_06140	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83879.1	KQP84480.1	ASF35_02600	ASF35_06165	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83879.1	KQP84483.1	ASF35_02600	ASF35_06180	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQP83879.1	KQP84498.1	ASF35_02600	ASF35_06280	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999