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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQP80788.13-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
KQP80789.1
Shikimate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KQP80790.1
Chorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.997
KQP81873.1
3-phosphoshikimate 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
KQP85102.1
3-dehydroquinate dehydratase; Catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
KQP84979.1
Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.980
KQP80861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
KQP82440.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.889
KQP80787.1
X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.854
KQP80785.1
N utilization substance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.827
KQP80786.1
Elongation factor P; Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.826
Your Current Organism:
Aeromicrobium sp. Leaf291
NCBI taxonomy Id: 1736325
Other names: A. sp. Leaf291
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