STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQQ27898.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
ASF54_03930
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.957
KQQ27886.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.766
KQQ27887.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.713
ASF54_00065
Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.621
KQQ28672.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.597
KQQ27474.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.585
KQQ27900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.582
KQQ28754.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.566
KQQ26853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.566
KQQ28720.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.535
Your Current Organism:
Frondihabitans sp. Leaf304
NCBI taxonomy Id: 1736329
Other names: F. sp. Leaf304
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