STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQQ28432.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)    
Predicted Functional Partners:
KQQ27474.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.838
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.801
KQQ28426.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.597
KQQ27419.1
NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.492
KQQ28427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
KQQ28428.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
KQQ28429.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
KQQ28430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
KQQ28431.1
Alkaline-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
KQQ28955.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.443
Your Current Organism:
Frondihabitans sp. Leaf304
NCBI taxonomy Id: 1736329
Other names: F. sp. Leaf304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.