STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQR53778.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (639 aa)    
Predicted Functional Partners:
KQR53966.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.880
KQR53779.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KQR53788.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
KQR52530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
KQR54693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.428
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
   0.428
KQR54509.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.425
KQR54905.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
KQR53526.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.408
KQR51240.1
Nicotinate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAPRTase family.
  
     0.406
Your Current Organism:
Leifsonia sp. Leaf336
NCBI taxonomy Id: 1736341
Other names: L. sp. Leaf336
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.