STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQU54381.1Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)    
Predicted Functional Partners:
hfq
RNA-binding protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
    
 
 0.948
KQU51956.1
Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.830
KQU52809.1
Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.820
KQU51807.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.813
KQU52026.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.813
ASG72_12460
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.772
KQU54273.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.754
KQU52765.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.754
KQU51697.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.754
KQU52081.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.754
Your Current Organism:
Bosea sp. Leaf344
NCBI taxonomy Id: 1736346
Other names: B. sp. Leaf344
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.